Ramiro Barrantes-Reynolds
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All (12)
adhesins (1)
bioinformatics (7)
book chapter (1)
cancer (2)
cancer genetics (1)
database (1)
DNA repair (4)
epigenetics (1)
epigenomics (1)
evolution (3)
gene regulation (1)
genomic instability (1)
genomics (2)
glycosylases (2)
host-pathogen interaction (1)
immunology (1)
immunotherapy (1)
influenza (1)
lupus (1)
metabolism (1)
methylome (1)
microbiology (1)
molecular biology (1)
nextflow (1)
nfcore (1)
pathogenesis (1)
personalized medicine (1)
phylogenetics (6)
protein structure (1)
RNAseq (1)
structural biology (1)
virology (1)

Rab11B is required for binding and entry of recent H3N2, but not H1N1, influenza A isolates

nextflow
nfcore
virology
influenza
host-pathogen interaction
Jun 2, 2026
Turner et al…Ramiro Barrantes-Reynolds…Emily Bruce

Novel antibody cocktail therapy targeting extracellular tumor-specific mutations to treat EMT6 cell line-derived triple-negative breast cancer

immunotherapy
cancer
personalized medicine
bioinformatics
Apr 6, 2026
Ramiro Barrantes-Reynolds

The EBV-Positive Tumor Methylome Is Distinct from EBV-Negative in Diffuse Large B-Cell Lymphoma

epigenomics
cancer
methylome
Jan 22, 2025
Ramiro Barrantes-Reynolds

T Cell Homeostatic Proliferation Promotes a Redox State That Drives Metabolic and Epigenetic Upregulation of Inflammatory Pathways in Lupus

immunology
metabolism
epigenetics
lupus
RNAseq
Mar 1, 2022
Ralph C. Budd, Christopher D. Scharer, Ramiro Barrantes-Reynolds, Scott Legunn, Karen A. Fortner

Using Shifts in Amino Acid Frequency and Substitution Rate to Identify Latent Structural Characters in Base-Excision Repair Enzymes

bioinformatics
structural biology
evolution
DNA repair
Oct 6, 2011
Ramiro Barrantes-Reynolds, Susan S. Wallace, Jeffrey P. Bond

DNA Repair Mechanisms and Genomic Instability

DNA repair
genomic instability
book chapter
bioinformatics
phylogenetics
Jan 1, 2010
Pumo, D.E., Barrantes-Reynolds, R., Kathe, S.D., Wallace, S.S., & Bond, J.P.

Plant and Fungal Fpg Homologs are Formamidopyrimidine DNA Glycosylases but not 8-Oxoguanine DNA Glycosylases

DNA repair
glycosylases
evolution
phylogenetics
bioinformatics
May 1, 2009
Kathe, S.D., Barrantes-Reynolds, R., Jaruga, P., Newton, M.R., Burrows, C.J., Bandaru, V., Dizdaroglu, M., Bond, J.P., & Wallace, S.S.

Clostridium Acetobutylicum 8-Oxoguanine DNA Glycosylase (Ogg) Differs from Eukaryotic Oggs with Respect to Opposite Base Discrimination

DNA repair
glycosylases
evolution
phylogenetics
bioinformatics
Jul 15, 2008
Robey-Bond, S.M., Barrantes-Reynolds, R., Bond, J.P., Wallace, S.S., & Bandaru, V.

Potential Regulatory Relationship Between the Nested Gene DDC8 and Its Host Gene Tissue Inhibitor of Metalloproteinase-2

genomics
gene regulation
phylogenetics
Jul 1, 2008
Jaworski, D.M., Beem-Miller, M., Lluri, G., & Barrantes-Reynolds, R.

Methylation-Controlled J Protein Promotes c-Jun Degradation to Prevent ABCB1 Transporter Expression

molecular biology
phylogenetics
bioinformatics
Aug 1, 2007
Hatle, K.M., Neveu, W., Dienz, O., Rymarchyk, S., Barrantes, R., Hale, S., Farley, N., Lounsbury, K.M., Bond, J.P., Taatjes, D.J., & Rincon, M.

Molecular Heterogeneity of EmaA, an Oligomeric Autotransporter Adhesin of Aggregatibacter Actinomycetemcomitans

microbiology
adhesins
protein structure
pathogenesis
phylogenetics
Aug 1, 2007
Tang, G., Ruiz, T., Barrantes-Reynolds, R., & Mintz, K.P.

The CDKN2A Database: Integrating Allelic Variants with Evolution, Structure, Function, and Disease Association

bioinformatics
genomics
database
cancer genetics
Dec 1, 2004
Murphy, J.A., Barrantes-Reynolds, R., Kocherlakota, R., Bond, J.P., & Greenblatt, M.S.
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